Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.52■□□□□ 0.87
O00370 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
O00370 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.52■□□□□ 0.87
O00370 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
O00370 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
O00370 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
O00370 SDHAP1-207ENST00000440850 2000 ntBASIC20.51■□□□□ 0.87
O00370 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.51■□□□□ 0.87
O00370 AP000974.1-201ENST00000623909 2387 ntBASIC20.51■□□□□ 0.87
O00370 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.51■□□□□ 0.87
O00370 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.51■□□□□ 0.87
O00370 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.51■□□□□ 0.87
O00370 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
O00370 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.51■□□□□ 0.87
O00370 AC073195.1-201ENST00000607241 877 ntBASIC20.51■□□□□ 0.87
O00370 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
O00370 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
O00370 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
O00370 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.5■□□□□ 0.87
O00370 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.5■□□□□ 0.87
O00370 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.5■□□□□ 0.87
O00370 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.5■□□□□ 0.87
O00370 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.5■□□□□ 0.87
O00370 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.5■□□□□ 0.87
O00370 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.5■□□□□ 0.87
O00370 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
O00370 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.5■□□□□ 0.87
O00370 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.5■□□□□ 0.87
O00370 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.5■□□□□ 0.87
O00370 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 AL032819.2-201ENST00000624543 2162 ntBASIC20.5■□□□□ 0.87
O00370 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.5■□□□□ 0.87
O00370 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
O00370 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
O00370 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
O00370 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
O00370 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.5■□□□□ 0.87
O00370 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
O00370 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.49■□□□□ 0.87
O00370 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.49■□□□□ 0.87
O00370 AC004980.1-204ENST00000429707 299 ntBASIC20.49■□□□□ 0.87
O00370 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 AL160286.2-201ENST00000567150 934 ntBASIC20.49■□□□□ 0.87
O00370 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
O00370 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.48■□□□□ 0.87
O00370 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
O00370 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
O00370 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
O00370 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.48■□□□□ 0.87
O00370 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.48■□□□□ 0.87
O00370 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.48■□□□□ 0.87
O00370 AC113410.3-201ENST00000623366 203 ntBASIC20.48■□□□□ 0.87
O00370 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
O00370 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
O00370 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
O00370 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.47■□□□□ 0.87
O00370 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
O00370 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.47■□□□□ 0.87
O00370 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 KRT16P1-201ENST00000399124 1418 ntBASIC20.47■□□□□ 0.87
O00370 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.47■□□□□ 0.87
O00370 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms