Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL353708.3-201ENST00000610272 989 ntBASIC19.78■□□□□ 0.76
DFFAO00273 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.78■□□□□ 0.76
DFFAO00273 CR392000.1-201ENST00000624770 1228 ntBASIC19.78■□□□□ 0.76
DFFAO00273 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.78■□□□□ 0.76
DFFAO00273 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.78■□□□□ 0.76
DFFAO00273 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
DFFAO00273 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
DFFAO00273 AL135905.2-201ENST00000584934 1404 ntBASIC19.77■□□□□ 0.76
DFFAO00273 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.77■□□□□ 0.76
DFFAO00273 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 AC138932.1-201ENST00000534164 6830 ntBASIC19.77■□□□□ 0.76
DFFAO00273 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
DFFAO00273 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
DFFAO00273 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.77■□□□□ 0.76
DFFAO00273 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.77■□□□□ 0.76
DFFAO00273 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 KSR1P1-201ENST00000446298 240 ntBASIC19.77■□□□□ 0.76
DFFAO00273 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.77■□□□□ 0.76
DFFAO00273 AL445675.2-201ENST00000620291 557 ntBASIC19.77■□□□□ 0.76
DFFAO00273 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.77■□□□□ 0.76
DFFAO00273 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DFFAO00273 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
DFFAO00273 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
DFFAO00273 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
DFFAO00273 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.76■□□□□ 0.75
DFFAO00273 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.76■□□□□ 0.75
DFFAO00273 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.76■□□□□ 0.75
DFFAO00273 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.76■□□□□ 0.75
DFFAO00273 AC073195.1-201ENST00000607241 877 ntBASIC19.76■□□□□ 0.75
DFFAO00273 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.76■□□□□ 0.75
DFFAO00273 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 KRT16P1-201ENST00000399124 1418 ntBASIC19.76■□□□□ 0.75
DFFAO00273 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DFFAO00273 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
DFFAO00273 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 RPS2P55-201ENST00000397318 883 ntBASIC19.75■□□□□ 0.75
DFFAO00273 FAM197Y1-201ENST00000421178 764 ntBASIC19.75■□□□□ 0.75
DFFAO00273 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.75■□□□□ 0.75
DFFAO00273 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.75■□□□□ 0.75
DFFAO00273 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 AC107956.1-201ENST00000494359 873 ntBASIC19.75■□□□□ 0.75
DFFAO00273 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.75■□□□□ 0.75
DFFAO00273 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.75■□□□□ 0.75
DFFAO00273 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.75■□□□□ 0.75
DFFAO00273 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.75■□□□□ 0.75
DFFAO00273 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.75■□□□□ 0.75
DFFAO00273 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.75■□□□□ 0.75
DFFAO00273 AC131212.4-201ENST00000623606 975 ntBASIC19.75■□□□□ 0.75
DFFAO00273 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
DFFAO00273 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DFFAO00273 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
DFFAO00273 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DFFAO00273 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
DFFAO00273 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DFFAO00273 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
DFFAO00273 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.74■□□□□ 0.75
DFFAO00273 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms