Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RCCD1A6NED2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RCCD1A6NED2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 AP006587.1-201ENST00000534129 1502 ntBASIC20.45■□□□□ 0.86
RCCD1A6NED2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RCCD1A6NED2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCCD1A6NED2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCCD1A6NED2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RCCD1A6NED2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCCD1A6NED2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCCD1A6NED2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 YBX1P10-201ENST00000444752 975 ntBASIC20.44■□□□□ 0.86
RCCD1A6NED2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCCD1A6NED2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCCD1A6NED2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCCD1A6NED2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.44■□□□□ 0.86
RCCD1A6NED2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RCCD1A6NED2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCCD1A6NED2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RCCD1A6NED2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 NOC2LP1-202ENST00000452600 2235 ntBASIC20.42■□□□□ 0.86
RCCD1A6NED2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RCCD1A6NED2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 AC091874.3-201ENST00000512672 1195 ntBASIC20.42■□□□□ 0.86
RCCD1A6NED2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.42■□□□□ 0.86
RCCD1A6NED2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RCCD1A6NED2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
RCCD1A6NED2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RCCD1A6NED2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.42■□□□□ 0.86
RCCD1A6NED2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 ANO7L1-203ENST00000602586 1720 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms