Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 MTDHP1-201ENST00000605323 784 ntBASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 AC026366.1-201ENST00000488803 879 ntBASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 PRKY-204ENST00000533551 1019 ntBASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM49BA6NDI0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 NEFHP1-201ENST00000412845 2629 ntBASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 KRT18P6-201ENST00000555540 1265 ntBASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
TRIM49BA6NDI0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 HLA-A-209ENST00000638375 975 ntBASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRIM49BA6NDI0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms