Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AL133373.2-201ENST00000623187 2828 ntBASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-1A0A0K0K1D8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AIRN-201ENST00000601203 4374 ntBASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 BID-214ENST00000617586 542 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 OR10C1-204ENST00000622521 1039 ntBASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC010980.2-201ENST00000587099 1412 ntBASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-1A0A0K0K1D8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GPX1P1-201ENST00000388829 606 ntBASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 CYP2T1P-201ENST00000432607 1285 ntBASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DUX4L16-201ENST00000555130 1264 ntBASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-1A0A0K0K1D8 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms