Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 AC090164.3-201ENST00000610780 2143 ntBASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 TFP1-202ENST00000475455 1573 ntBASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 AC093787.1-201ENST00000450396 207 ntBASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 AL031598.1-201ENST00000561511 1773 ntBASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 AC087623.3-201ENST00000607047 1098 ntBASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 AC135050.7-201ENST00000624508 2218 ntBASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRAV5A0A0B4J249 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 SDHAP1-207ENST00000440850 2000 ntBASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 BID-214ENST00000617586 542 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 OR10C1-204ENST00000622521 1039 ntBASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 AL133373.2-201ENST00000623187 2828 ntBASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV5A0A0B4J249 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms