Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 KRT8P17-201ENST00000453110 1448 ntBASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 MIR3621-201ENST00000580529 85 ntBASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 AC126544.1-201ENST00000580842 1059 ntBASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 AL358852.1-201ENST00000623174 1268 ntBASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRAV13-2A0A0B4J235 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 TRIR-202ENST00000588213 841 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV13-2A0A0B4J235 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms