Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 DUX4L28-201ENST00000623687 678 ntBASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAV7A0A075B6U4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 AL034346.1-201ENST00000568244 1277 ntBASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRAV7A0A075B6U4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRAV7A0A075B6U4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TRAV7A0A075B6U4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
TRAV7A0A075B6U4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRAV7A0A075B6U4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRAV7A0A075B6U4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
TRAV7A0A075B6U4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRAV7A0A075B6U4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms