Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC129502.1-201ENST00000623261 1654 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 Y_RNA.20-201ENST00000362479 113 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 Y_RNA.151-201ENST00000363566 112 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 RNU4-34P-201ENST00000410431 124 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 RN7SKP293-201ENST00000411389 296 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 RPL37P18-201ENST00000411602 243 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AL645936.1-201ENST00000441979 518 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC108161.1-201ENST00000461060 402 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC083806.1-201ENST00000468934 316 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC018437.1-201ENST00000492214 406 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 RPS10P20-201ENST00000494130 463 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 MTCO3P44-201ENST00000510977 541 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 Y_RNA.673-201ENST00000516306 88 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 SNORA81.3-201ENST00000517283 198 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 ERHP1-201ENST00000523006 310 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC009643.1-201ENST00000532030 391 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 AL390123.1-201ENST00000603216 237 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AL034351.1-201ENST00000605288 668 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 FAM27E2-201ENST00000619668 403 ntBASIC6.58□□□□□ -1.36
PHOX2BQ99453 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.58□□□□□ -1.36
PHOX2BQ99453 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC025809.2-201ENST00000625085 1802 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 RNU6-339P-201ENST00000384310 107 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 MIR143-201ENST00000385300 106 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 ENSAP1-201ENST00000392855 326 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 RNU2-50P-201ENST00000410494 143 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 BX276092.3-201ENST00000424182 230 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 CYCSP43-201ENST00000438233 310 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 PPIAP7-201ENST00000454070 489 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 TRBVB-201ENST00000477100 408 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC063943.2-201ENST00000495697 534 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC146944.3-201ENST00000509969 371 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 AL671862.1-201ENST00000515851 349 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 RNU6-390P-201ENST00000516259 103 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 RN7SKP60-201ENST00000516985 239 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 IGKV2D-23-201ENST00000518179 286 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 AP006587.4-201ENST00000526053 529 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 AP000620.1-201ENST00000527147 504 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC023245.2-201ENST00000530760 2978 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 MIR1269B-201ENST00000580405 75 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 ELOCP5-201ENST00000604924 333 ntBASIC6.57□□□□□ -1.36
PHOX2BQ99453 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.57□□□□□ -1.36
PHOX2BQ99453 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHOX2BQ99453 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms