Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 AL049839.1-201ENST00000556151 657 ntBASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 AC209154.1-201ENST00000582156 337 ntBASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 AC119403.2-201ENST00000590960 598 ntBASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 uc_338.26-201ENST00000612659 160 ntBASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO4Q2I0M5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 CDY11P-201ENST00000447168 1651 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC126755.2-208ENST00000327792 462 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC138969.1-213ENST00000331436 462 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 RNU6-704P-201ENST00000364162 103 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 Y_RNA.214-201ENST00000364201 112 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 RNY4P16-201ENST00000364768 94 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 SNORA67-201ENST00000384423 137 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 RNU2-29P-201ENST00000410423 189 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AL590139.1-201ENST00000416267 400 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 RBMY1KP-201ENST00000423480 476 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC137499.1-201ENST00000427602 88 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 RPL23AP60-201ENST00000450011 454 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC103987.1-201ENST00000473394 348 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC079080.1-201ENST00000479841 822 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 RPS27P23-201ENST00000487608 251 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC022447.4-201ENST00000504053 364 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC022493.2-201ENST00000506122 481 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC092436.1-201ENST00000506450 503 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC116337.1-201ENST00000509680 687 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC073581.1-201ENST00000519036 575 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AL049779.3-201ENST00000557141 606 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AL355365.1-201ENST00000616480 294 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 AC011504.1-201ENST00000623331 4103 ntBASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO4Q2I0M5 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 AC034229.2-201ENST00000566945 2508 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 Y_RNA.26-201ENST00000362539 101 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 RNU6-115P-201ENST00000364310 107 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 RNVU1-6-201ENST00000364688 164 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 SNORD14.1-201ENST00000365609 90 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 RNU6-952P-201ENST00000391164 108 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 MIR548H3-201ENST00000408771 118 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 RNU6-1050P-201ENST00000410388 107 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 RPS6P23-201ENST00000413224 722 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 ELOCP20-201ENST00000422460 345 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 AC093716.1-201ENST00000435923 377 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 TXNP5-201ENST00000441043 315 ntBASIC5.53□□□□□ -1.52
RSPO4Q2I0M5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms