Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
HOXD11P31277 AL078599.1-201ENST00000402075 293 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 RN7SKP154-201ENST00000410136 290 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 AC012354.2-201ENST00000423051 461 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 AL389915.2-201ENST00000454576 441 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXD11P31277 RPS20P22-201ENST00000473700 357 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 AC008945.1-201ENST00000505144 499 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 RNU6-904P-201ENST00000516206 101 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD11P31277 AC019159.1-201ENST00000605094 187 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 MIR6885-201ENST00000612241 66 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXD11P31277 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD11P31277 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD11P31277 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD11P31277 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
HOXD11P31277 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HOXD11P31277 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
HOXD11P31277 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
HOXD11P31277 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXD11P31277 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 ABCA17P-204ENST00000494925 3478 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD11P31277 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXD11P31277 RNU6-799P-201ENST00000363567 107 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 MIR181B1-201ENST00000385240 110 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 RNA5SP496-201ENST00000391240 109 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 RN7SKP261-201ENST00000410948 278 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 PUDPP1-201ENST00000421058 495 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 AC078809.1-201ENST00000427601 140 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 PRDX2P4-201ENST00000447134 600 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 RN7SL456P-201ENST00000469290 295 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXD11P31277 SNORA70.12-201ENST00000516084 153 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 SNORA31.8-201ENST00000516327 108 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 AC068339.1-201ENST00000526965 141 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 AC005363.1-201ENST00000530779 351 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 RN7SL426P-201ENST00000579106 295 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXD11P31277 AP001017.1-201ENST00000591378 482 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 RPS28P1-201ENST00000604589 187 ntBASIC8.14□□□□□ -1.11
HOXD11P31277 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXD11P31277 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
HOXD11P31277 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
HOXD11P31277 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
HOXD11P31277 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD11P31277 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD11P31277 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD11P31277 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXD11P31277 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
HOXD11P31277 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
HOXD11P31277 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
HOXD11P31277 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXD11P31277 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXD11P31277 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 AC012360.3-201ENST00000610036 3449 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 Y_RNA.313-201ENST00000365095 103 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 RNU6-484P-201ENST00000384016 107 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXD11P31277 AL137784.1-201ENST00000407121 745 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 U3.33-201ENST00000408117 204 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXD11P31277 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXD11P31277 AL354714.5-201ENST00000450131 590 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXD11P31277 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXD11P31277 RNU7-115P-201ENST00000516433 55 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXD11P31277 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXD11P31277 AC025754.2-201ENST00000606491 432 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 RN7SL301P-202ENST00000618767 298 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 MRPL57P1-201ENST00000621486 265 ntBASIC8.13□□□□□ -1.11
HOXD11P31277 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXD11P31277 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 CRX-207ENST00000613299 4193 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXD11P31277 RPS6KB1-201ENST00000225577 5375 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXD11P31277 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD11P31277 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 340.6 ms