Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCH2Q9Y6C5 KPNA2P2-201ENST00000419546 1489 ntBASIC5.44□□□□□ -1.54
PTCH2Q9Y6C5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCH2Q9Y6C5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCH2Q9Y6C5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCH2Q9Y6C5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 RNU6-343P-201ENST00000364709 104 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 SNORD115.1-201ENST00000391109 76 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 RPS26P8-201ENST00000393490 348 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 RPL31P45-201ENST00000419532 356 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 VTI1BP4-201ENST00000427516 527 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 RPL22P17-201ENST00000438729 315 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC099563.1-201ENST00000456086 418 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC087385.1-201ENST00000475062 312 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 ACTR3P3-201ENST00000480448 893 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC016559.2-201ENST00000510759 359 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 RNU6-1003P-201ENST00000517099 105 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC023632.4-201ENST00000517783 191 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 IGLVIV-53-201ENST00000520107 367 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC027369.5-201ENST00000533838 755 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 MIR5699-201ENST00000578903 90 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 MIR3682-201ENST00000581338 84 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 MIR3158-1-201ENST00000583596 81 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC009977.1-201ENST00000586015 570 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AL022154.1-201ENST00000604698 785 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC113194.1-201ENST00000606037 500 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC013476.2-201ENST00000614456 459 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AL160394.1-201ENST00000624765 724 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 AC092447.10-201ENST00000620607 1652 ntBASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCH2Q9Y6C5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL049780.3-201ENST00000624612 1583 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 RNA5SP44-201ENST00000410446 133 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC009237.10-201ENST00000414112 510 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC009237.5-201ENST00000414271 501 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL354766.1-201ENST00000423396 542 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL645608.4-201ENST00000423619 154 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 COX6CP13-201ENST00000428703 226 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC126182.1-201ENST00000478134 357 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 HMGB1P36-201ENST00000487709 576 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 RN7SL441P-201ENST00000492388 296 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL358832.1-201ENST00000497800 389 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 NDUFB4P2-201ENST00000509515 391 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 RN7SKP277-201ENST00000516895 283 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC087883.1-201ENST00000551882 391 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC087481.2-201ENST00000565492 330 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 RN7SL652P-201ENST00000577769 300 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC025588.3-201ENST00000604182 274 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC009237.17-201ENST00000618111 748 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 AP005019.3-201ENST00000620418 560 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 MIR4496-201ENST00000635896 61 ntBASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCH2Q9Y6C5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms