Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 GYG2P1-203ENST00000382965 149 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 Y_RNA.567-201ENST00000384736 106 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AL133270.1-201ENST00000402635 279 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU6-519P-201ENST00000410590 108 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 PRYP2-201ENST00000416652 492 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 MT1XP1-201ENST00000421314 186 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 RPLP1P13-201ENST00000434567 299 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 PHBP12-201ENST00000453979 811 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU7-113P-201ENST00000459273 62 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 RPS27AP10-201ENST00000496103 208 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 SNRPCP16-201ENST00000506029 210 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 EVX1-AS-201ENST00000517726 480 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 SNRPCP17-201ENST00000520330 205 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AP003484.1-201ENST00000530974 250 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 C1RL-211ENST00000545280 449 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AL513043.2-201ENST00000573941 143 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC119868.1-201ENST00000579307 336 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR4512-201ENST00000583257 77 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL577P-201ENST00000584532 303 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC134879.2-201ENST00000604178 389 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC006441.5-201ENST00000612680 209 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AP002383.6-201ENST00000616726 697 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR7850-201ENST00000618087 79 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC118344.2-201ENST00000622968 4765 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC020656.2-201ENST00000613291 5309 ntBASIC4.53□□□□□ -1.69
KRTAP3-3Q9BYR6 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 ATOX1-201ENST00000313115 488 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 MIR34C-201ENST00000384831 77 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 IGLV8-61-201ENST00000390283 414 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 TIMM8AP1-201ENST00000419283 295 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 BX664727.2-201ENST00000420308 228 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 AL157395.1-201ENST00000427630 438 ntTSL 3 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 GAPDHP59-201ENST00000435908 267 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL116P-201ENST00000470786 305 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL38P-201ENST00000485238 296 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 GAPDHP35-201ENST00000513369 976 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 FGF7P7-201ENST00000514120 227 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 AC120036.4-201ENST00000521874 256 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 MIR4438-201ENST00000585271 93 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 EIF3K-208ENST00000588934 501 ntTSL 3 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 AC091193.1-201ENST00000604640 448 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL462P-201ENST00000610302 261 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 Metazoa_SRP.142-201ENST00000612810 316 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL422P-201ENST00000612850 261 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CR848007.3-201ENST00000615762 228 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL343P-201ENST00000620904 261 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 AL513478.1-201ENST00000621265 228 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL640P-201ENST00000622591 261 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 AC244452.4-201ENST00000637112 283 ntBASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms