Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 MRPS18BP2-201ENST00000434310 759 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 USP9YP12-201ENST00000450481 570 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SSXP1-201ENST00000453640 473 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 MTCO1P42-201ENST00000457379 726 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SNORD108-201ENST00000459332 71 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 HMGB1P25-201ENST00000468402 607 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 VWA8P1-201ENST00000510889 176 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC022447.1-201ENST00000515358 464 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 RNU2-30P-201ENST00000516209 141 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 Y_RNA.719-201ENST00000517156 106 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 MIR5697-201ENST00000578045 78 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 MIR3176-201ENST00000582210 90 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC090181.2-201ENST00000602975 672 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AL451064.1-201ENST00000607718 471 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC103591.3-201ENST00000608684 209 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC020634.1-201ENST00000608701 549 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC122108.2-201ENST00000611946 526 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AL049794.2-201ENST00000616301 365 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC025031.4-201ENST00000621248 3271 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 THAP12P4-201ENST00000528321 2266 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RARSP1-201ENST00000542842 1418 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 MAPK10-253ENST00000641010 4072 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 U3.15-201ENST00000365398 212 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RNU6-359P-201ENST00000365466 108 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RNU6-533P-201ENST00000384144 107 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RNU6-809P-201ENST00000384461 107 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 Y_RNA.559-201ENST00000384686 107 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 MIR513A2-201ENST00000385249 127 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RN7SKP56-201ENST00000410513 331 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RNA5SP104-201ENST00000410989 118 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RPL21P32-201ENST00000419877 477 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AL391219.1-201ENST00000422570 483 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC091862.1-201ENST00000438016 1100 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AL353748.1-201ENST00000440753 474 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC011753.3-201ENST00000443436 406 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AL590365.1-201ENST00000450788 243 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 CFTRP1-201ENST00000456646 183 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 RN7SL222P-201ENST00000476452 299 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC074386.1-201ENST00000476560 767 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC079140.3-201ENST00000511111 550 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 KCTD9P2-201ENST00000512203 1013 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AP002963.1-201ENST00000530590 184 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC100770.1-201ENST00000532310 322 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 SETP7-201ENST00000552169 453 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC005771.1-201ENST00000585581 349 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AL365503.1-201ENST00000605247 905 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC055876.5-201ENST00000605667 259 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms