Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 RN7SKP238-201ENST00000516483 249 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH1Q08174 WBP1LP3-201ENST00000523033 208 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDH1Q08174 COPS8P3-201ENST00000526024 482 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 EIF4A2P5-201ENST00000529914 499 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH1Q08174 AC063950.1-201ENST00000552036 308 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH1Q08174 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 MIR3942-201ENST00000585264 109 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH1Q08174 AL592436.1-201ENST00000605135 558 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH1Q08174 AL713922.2-201ENST00000619384 716 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 uc_338.22-201ENST00000622722 187 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC091925.1-201ENST00000623204 462 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDH1Q08174 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH1Q08174 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH1Q08174 THAP12P4-201ENST00000528321 2266 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH1Q08174 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH1Q08174 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH1Q08174 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.59□□□□□ -1.52
PCDH1Q08174 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.59□□□□□ -1.52
PCDH1Q08174 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH1Q08174 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH1Q08174 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH1Q08174 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 PANDAR-201ENST00000629595 1506 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 Y_RNA.28-201ENST00000362554 111 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 RNA5SP391-201ENST00000363456 119 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 RNU6-370P-201ENST00000411008 104 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 GAPDHP48-201ENST00000436626 961 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 RPL32P28-201ENST00000443577 397 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 RAC1P7-201ENST00000445367 377 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AL118520.1-201ENST00000450770 291 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 SNORD125-201ENST00000459538 96 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 RNU6-1208P-201ENST00000459588 107 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 UBFD1P1-201ENST00000473259 814 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 RN7SL570P-201ENST00000484405 292 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AC106872.2-201ENST00000494303 480 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDH1Q08174 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 RNU7-51P-201ENST00000516560 62 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 RNU6-273P-201ENST00000516937 96 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 RNA5SP503-201ENST00000517047 117 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 HMGB1P41-201ENST00000520234 440 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 HMGN2P36-201ENST00000529541 409 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AL118558.2-201ENST00000556294 238 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AC096996.1-201ENST00000563813 325 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AC007342.5-201ENST00000571340 2142 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH1Q08174 MIR4703-201ENST00000577728 79 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 COX6CP3-201ENST00000580869 223 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC092807.2-201ENST00000609367 243 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 MIR6071-201ENST00000616741 78 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDH1Q08174 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC129915.3-201ENST00000634128 948 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 PARP4P2-201ENST00000446672 3326 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH1Q08174 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
PCDH1Q08174 AC020633.1-201ENST00000468439 2247 ntBASIC5.58□□□□□ -1.52
PCDH1Q08174 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms