RNA–Protein interactions for RNA: ENST00000457858.1

LINC01038-201, Transcript of long intergenic non-protein coding RNA 1038, humanhuman

TSL 3 BASIC

Gene LINC01038, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01038-201ENST00000457858 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
LINC01038-201ENST00000457858 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
LINC01038-201ENST00000457858 PHF23Q9BUL5 403 aaPredicted RBP15.19■□□□□ 0.02
LINC01038-201ENST00000457858 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
LINC01038-201ENST00000457858 FOXD1Q16676 465 aa14.06□□□□□ -0.16
LINC01038-201ENST00000457858 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.17
LINC01038-201ENST00000457858 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
LINC01038-201ENST00000457858 ADRA2BP18089 450 aa13.45□□□□□ -0.26
LINC01038-201ENST00000457858 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
LINC01038-201ENST00000457858 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
LINC01038-201ENST00000457858 MSH5O43196 834 aa13.05□□□□□ -0.32
LINC01038-201ENST00000457858 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
LINC01038-201ENST00000457858 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
LINC01038-201ENST00000457858 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
LINC01038-201ENST00000457858 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
LINC01038-201ENST00000457858 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
LINC01038-201ENST00000457858 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
LINC01038-201ENST00000457858 KCNA4P22459 653 aa11.93□□□□□ -0.5
LINC01038-201ENST00000457858 NPM3O75607 178 aaKnown RBP11.8□□□□□ -0.52
LINC01038-201ENST00000457858 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
LINC01038-201ENST00000457858 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
LINC01038-201ENST00000457858 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
LINC01038-201ENST00000457858 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
LINC01038-201ENST00000457858 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
LINC01038-201ENST00000457858 SLC4A1APQ9BWU0 796 aaKnown RBP11.36□□□□□ -0.59
LINC01038-201ENST00000457858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01038-201ENST00000457858 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
LINC01038-201ENST00000457858 RNF39Q9H2S5 420 aa11.15□□□□□ -0.62
LINC01038-201ENST00000457858 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
LINC01038-201ENST00000457858 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
LINC01038-201ENST00000457858 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
LINC01038-201ENST00000457858 ZBTB22O15209 634 aa10.96□□□□□ -0.65
LINC01038-201ENST00000457858 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
LINC01038-201ENST00000457858 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
LINC01038-201ENST00000457858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
LINC01038-201ENST00000457858 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
LINC01038-201ENST00000457858 SAMD1Q6SPF0 538 aaPredicted RBP10.84□□□□□ -0.67
LINC01038-201ENST00000457858 APLP2Q06481 763 aa10.82□□□□□ -0.68
LINC01038-201ENST00000457858 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
LINC01038-201ENST00000457858 CAPN15O75808 1086 aa10.78□□□□□ -0.68
LINC01038-201ENST00000457858 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
LINC01038-201ENST00000457858 TRHP20396 242 aaPredicted RBP10.69□□□□□ -0.7
LINC01038-201ENST00000457858 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
LINC01038-201ENST00000457858 ATXN8OSP0DMR3 200 aa10.62□□□□□ -0.71
LINC01038-201ENST00000457858 ATF5Q9Y2D1 282 aaPredicted RBP10.6□□□□□ -0.71
LINC01038-201ENST00000457858 DSG3P32926 999 aa10.57□□□□□ -0.72
LINC01038-201ENST00000457858 ABCB7O75027 752 aa10.55□□□□□ -0.72
LINC01038-201ENST00000457858 POTEHQ6S545 545 aa10.55□□□□□ -0.72
LINC01038-201ENST00000457858 POLA2Q14181 598 aa10.46□□□□□ -0.73
LINC01038-201ENST00000457858 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
LINC01038-201ENST00000457858 FBLN2P98095 1184 aa10.23□□□□□ -0.77
LINC01038-201ENST00000457858 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
LINC01038-201ENST00000457858 OSCARQ8IYS5 282 aa10.14□□□□□ -0.79
LINC01038-201ENST00000457858 RBM42Q9BTD8 480 aaKnown RBP10.12□□□□□ -0.79
LINC01038-201ENST00000457858 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
LINC01038-201ENST00000457858 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
LINC01038-201ENST00000457858 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
LINC01038-201ENST00000457858 ZNF692Q9BU19 519 aaPredicted RBP9.95□□□□□ -0.82
LINC01038-201ENST00000457858 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
LINC01038-201ENST00000457858 SPDYE4A6NLX3 237 aa9.9□□□□□ -0.82
LINC01038-201ENST00000457858 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
LINC01038-201ENST00000457858 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
LINC01038-201ENST00000457858 FKBP8Q14318 412 aa9.82□□□□□ -0.84
LINC01038-201ENST00000457858 PABPN1Q86U42 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINC01038-201ENST00000457858 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
LINC01038-201ENST00000457858 PITPNM1O00562 1244 aa9.74□□□□□ -0.85
LINC01038-201ENST00000457858 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
LINC01038-201ENST00000457858 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
LINC01038-201ENST00000457858 PROM2Q8N271 834 aa9.66□□□□□ -0.86
LINC01038-201ENST00000457858 STAG3Q9UJ98 1225 aa9.63□□□□□ -0.87
LINC01038-201ENST00000457858 PRR29P0C7W0 189 aa9.61□□□□□ -0.87
LINC01038-201ENST00000457858 SP7Q8TDD2 431 aaPredicted RBP9.6□□□□□ -0.87
LINC01038-201ENST00000457858 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
LINC01038-201ENST00000457858 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
LINC01038-201ENST00000457858 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
LINC01038-201ENST00000457858 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
LINC01038-201ENST00000457858 CHADLQ6NUI6 762 aa9.48□□□□□ -0.89
LINC01038-201ENST00000457858 CREBZFQ9NS37 354 aa9.43□□□□□ -0.9
LINC01038-201ENST00000457858 MIER1Q8N108 512 aa9.41□□□□□ -0.9
LINC01038-201ENST00000457858 PLEKHG5O94827 1062 aa9.4□□□□□ -0.9
LINC01038-201ENST00000457858 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.9
LINC01038-201ENST00000457858 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
LINC01038-201ENST00000457858 FARP1Q9Y4F1 1045 aaPredicted RBP9.37□□□□□ -0.91
LINC01038-201ENST00000457858 HAX1O00165 279 aa9.31□□□□□ -0.92
LINC01038-201ENST00000457858 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC01038-201ENST00000457858 ZBTB47Q9UFB7 747 aaPredicted RBP9.3□□□□□ -0.92
LINC01038-201ENST00000457858 MNX1P50219 401 aaPredicted RBP9.29□□□□□ -0.92
LINC01038-201ENST00000457858 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
LINC01038-201ENST00000457858 C19orf67A6NJJ6 358 aa9.24□□□□□ -0.93
LINC01038-201ENST00000457858 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
LINC01038-201ENST00000457858 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
LINC01038-201ENST00000457858 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
LINC01038-201ENST00000457858 EVX2Q03828 476 aa9.17□□□□□ -0.94
LINC01038-201ENST00000457858 TSPYL2Q9H2G4 693 aaPredicted RBP9.16□□□□□ -0.94
LINC01038-201ENST00000457858 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
LINC01038-201ENST00000457858 RASEFQ8IZ41 740 aa9.15□□□□□ -0.94
LINC01038-201ENST00000457858 NUBP1P53384 320 aa9.14□□□□□ -0.95
LINC01038-201ENST00000457858 SPOCK2Q92563 424 aa9.14□□□□□ -0.95
LINC01038-201ENST00000457858 FAM212AQ96EL1 285 aa9.13□□□□□ -0.95
LINC01038-201ENST00000457858 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms