Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.94□□□□□ -1.78
VCPP55072 AL034351.1-201ENST00000605288 668 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC026741.1-201ENST00000605892 482 ntBASIC3.94□□□□□ -1.78
VCPP55072 U7.8-201ENST00000619968 63 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC079684.1-201ENST00000621405 437 ntBASIC3.94□□□□□ -1.78
VCPP55072 RNU6-156P-201ENST00000621869 107 ntBASIC3.94□□□□□ -1.78
VCPP55072 MIR4278-201ENST00000636094 69 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.94□□□□□ -1.78
VCPP55072 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.94□□□□□ -1.78
VCPP55072 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
VCPP55072 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 CR381670.1-201ENST00000624291 1693 ntBASIC3.94□□□□□ -1.78
VCPP55072 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 AF127577.6-201ENST00000623352 2191 ntBASIC3.93□□□□□ -1.78
VCPP55072 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
VCPP55072 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCPP55072 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCPP55072 SNORA63.3-201ENST00000362682 132 ntBASIC3.93□□□□□ -1.78
VCPP55072 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.93□□□□□ -1.78
VCPP55072 SOD2P1-201ENST00000396543 562 ntBASIC3.93□□□□□ -1.78
VCPP55072 RPL7P60-201ENST00000397636 735 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.93□□□□□ -1.78
VCPP55072 BX664727.1-201ENST00000416024 466 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.93□□□□□ -1.78
VCPP55072 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.93□□□□□ -1.78
VCPP55072 AC241520.1-201ENST00000422654 1099 ntBASIC3.93□□□□□ -1.78
VCPP55072 USP9YP36-201ENST00000424581 829 ntBASIC3.93□□□□□ -1.78
VCPP55072 USP9YP31-201ENST00000431405 881 ntBASIC3.93□□□□□ -1.78
VCPP55072 CKS1BP5-201ENST00000434172 273 ntBASIC3.93□□□□□ -1.78
VCPP55072 SKP1P1-201ENST00000438081 489 ntBASIC3.93□□□□□ -1.78
VCPP55072 SNORA71B-202ENST00000439232 272 ntBASIC3.93□□□□□ -1.78
VCPP55072 AL591503.2-201ENST00000442314 1005 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC092902.1-201ENST00000486999 259 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC108941.1-201ENST00000502853 530 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.93□□□□□ -1.78
VCPP55072 AC093755.1-201ENST00000512950 1023 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.93□□□□□ -1.78
VCPP55072 RN7SKP283-201ENST00000517197 270 ntBASIC3.93□□□□□ -1.78
VCPP55072 MTND2P26-201ENST00000528255 1029 ntBASIC3.93□□□□□ -1.78
VCPP55072 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.93□□□□□ -1.78
VCPP55072 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.93□□□□□ -1.78
VCPP55072 AC010653.1-201ENST00000571108 881 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC099489.2-201ENST00000574976 260 ntBASIC3.93□□□□□ -1.78
VCPP55072 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.93□□□□□ -1.78
VCPP55072 MTATP6P2-201ENST00000603319 678 ntBASIC3.93□□□□□ -1.78
VCPP55072 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.93□□□□□ -1.78
VCPP55072 VN1R9P-201ENST00000614184 867 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC253576.2-201ENST00000618815 580 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.93□□□□□ -1.78
VCPP55072 FAM157B-203ENST00000639350 358 ntBASIC3.93□□□□□ -1.78
VCPP55072 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VCPP55072 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.93□□□□□ -1.78
VCPP55072 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VCPP55072 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.93□□□□□ -1.78
VCPP55072 AC119744.1-201ENST00000454746 1715 ntBASIC3.92□□□□□ -1.78
VCPP55072 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCPP55072 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VCPP55072 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VCPP55072 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.92□□□□□ -1.78
VCPP55072 AC000367.1-201ENST00000452711 1766 ntBASIC3.92□□□□□ -1.78
VCPP55072 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VCPP55072 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VCPP55072 RNU6-328P-201ENST00000390887 106 ntBASIC3.92□□□□□ -1.78
VCPP55072 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.92□□□□□ -1.78
VCPP55072 ATP5A1P2-201ENST00000412323 255 ntBASIC3.92□□□□□ -1.78
VCPP55072 TCEA1P2-201ENST00000420496 906 ntBASIC3.92□□□□□ -1.78
VCPP55072 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 HIGD1AP12-201ENST00000427832 281 ntBASIC3.92□□□□□ -1.78
VCPP55072 AC093422.3-201ENST00000428506 305 ntBASIC3.92□□□□□ -1.78
VCPP55072 AC005326.1-201ENST00000429197 123 ntBASIC3.92□□□□□ -1.78
VCPP55072 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.92□□□□□ -1.78
VCPP55072 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 AC009263.1-201ENST00000441193 1239 ntBASIC3.92□□□□□ -1.78
VCPP55072 RPL23AP33-201ENST00000442301 452 ntBASIC3.92□□□□□ -1.78
VCPP55072 RPS3AP46-201ENST00000448352 682 ntBASIC3.92□□□□□ -1.78
VCPP55072 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.92□□□□□ -1.78
VCPP55072 MTCO3P16-201ENST00000454456 754 ntBASIC3.92□□□□□ -1.78
VCPP55072 CFTRP1-201ENST00000456646 183 ntBASIC3.92□□□□□ -1.78
VCPP55072 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VCPP55072 RPL7P47-201ENST00000497299 556 ntBASIC3.92□□□□□ -1.78
VCPP55072 AC016550.1-201ENST00000505348 785 ntBASIC3.92□□□□□ -1.78
VCPP55072 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 AC023141.12-201ENST00000512399 199 ntBASIC3.92□□□□□ -1.78
VCPP55072 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
VCPP55072 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.92□□□□□ -1.78
VCPP55072 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.92□□□□□ -1.78
VCPP55072 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.92□□□□□ -1.78
VCPP55072 EIF4BP1-201ENST00000554881 351 ntBASIC3.92□□□□□ -1.78
VCPP55072 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.92□□□□□ -1.78
VCPP55072 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.92□□□□□ -1.78
VCPP55072 AC022079.2-201ENST00000619739 566 ntBASIC3.92□□□□□ -1.78
VCPP55072 MIR4496-201ENST00000635896 61 ntBASIC3.92□□□□□ -1.78
VCPP55072 U6.107-201ENST00000637108 79 ntBASIC3.92□□□□□ -1.78
VCPP55072 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms