Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ARPC3P2-201ENST00000457786 533 ntBASIC2.96□□□□□ -1.94
CD74P04233 RPL23AP67-201ENST00000465341 474 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC104689.1-201ENST00000473356 768 ntBASIC2.96□□□□□ -1.94
CD74P04233 RPS27AP1-201ENST00000475545 471 ntBASIC2.96□□□□□ -1.94
CD74P04233 MTCO3P35-201ENST00000485582 781 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.96□□□□□ -1.94
CD74P04233 AC010265.1-201ENST00000513509 211 ntBASIC2.96□□□□□ -1.94
CD74P04233 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 SNORA76.2-201ENST00000517095 137 ntBASIC2.96□□□□□ -1.94
CD74P04233 MTND2P26-201ENST00000528255 1029 ntBASIC2.96□□□□□ -1.94
CD74P04233 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.96□□□□□ -1.94
CD74P04233 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.96□□□□□ -1.94
CD74P04233 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.96□□□□□ -1.94
CD74P04233 AL163153.1-201ENST00000554223 283 ntBASIC2.96□□□□□ -1.94
CD74P04233 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.96□□□□□ -1.94
CD74P04233 AC074050.1-201ENST00000563247 211 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC106785.1-201ENST00000565935 262 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC120057.2-201ENST00000571520 271 ntBASIC2.96□□□□□ -1.94
CD74P04233 MIR4474-201ENST00000579189 78 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC012254.4-201ENST00000588843 273 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 IGHV3-29-201ENST00000604817 344 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC079610.2-201ENST00000604818 690 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 AP003355.3-201ENST00000623465 114 ntBASIC2.96□□□□□ -1.94
CD74P04233 U6.107-201ENST00000637108 79 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CD74P04233 AC110774.1-201ENST00000623567 2018 ntBASIC2.96□□□□□ -1.94
CD74P04233 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CD74P04233 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CD74P04233 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 MTND5P11-201ENST00000511037 1812 ntBASIC2.96□□□□□ -1.94
CD74P04233 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 PABPC1P7-201ENST00000413177 1513 ntBASIC2.95□□□□□ -1.94
CD74P04233 SRP72P2-201ENST00000344851 1979 ntBASIC2.95□□□□□ -1.94
CD74P04233 METTL21EP-201ENST00000298105 713 ntBASIC2.95□□□□□ -1.94
CD74P04233 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 U3.11-201ENST00000364476 212 ntBASIC2.95□□□□□ -1.94
CD74P04233 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.95□□□□□ -1.94
CD74P04233 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 OR52E6-202ENST00000379946 954 ntBASIC2.95□□□□□ -1.94
CD74P04233 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CD74P04233 RPL21P65-201ENST00000406094 466 ntBASIC2.95□□□□□ -1.94
CD74P04233 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
CD74P04233 RNU2-6P-201ENST00000411404 190 ntBASIC2.95□□□□□ -1.94
CD74P04233 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.95□□□□□ -1.94
CD74P04233 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.95□□□□□ -1.94
CD74P04233 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 OR4F13P-201ENST00000428478 931 ntBASIC2.95□□□□□ -1.94
CD74P04233 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.95□□□□□ -1.94
CD74P04233 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.95□□□□□ -1.94
CD74P04233 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.95□□□□□ -1.94
CD74P04233 RPL23AP55-201ENST00000498163 452 ntBASIC2.95□□□□□ -1.94
CD74P04233 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 AC108078.3-201ENST00000502633 489 ntBASIC2.95□□□□□ -1.94
CD74P04233 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
CD74P04233 KCTD9P5-201ENST00000504141 1170 ntBASIC2.95□□□□□ -1.94
CD74P04233 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.95□□□□□ -1.94
CD74P04233 AC133963.2-201ENST00000513686 578 ntBASIC2.95□□□□□ -1.94
CD74P04233 RNU6-352P-201ENST00000516908 107 ntBASIC2.95□□□□□ -1.94
CD74P04233 RN7SKP96-201ENST00000516948 297 ntBASIC2.95□□□□□ -1.94
CD74P04233 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.95□□□□□ -1.94
CD74P04233 MTCYBP41-201ENST00000528913 1123 ntBASIC2.95□□□□□ -1.94
CD74P04233 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 OR4T1P-201ENST00000554933 911 ntBASIC2.95□□□□□ -1.94
CD74P04233 AC079148.1-201ENST00000565944 819 ntBASIC2.95□□□□□ -1.94
CD74P04233 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.95□□□□□ -1.94
CD74P04233 AC079880.2-201ENST00000603790 1213 ntBASIC2.95□□□□□ -1.94
CD74P04233 HMGN2P28-201ENST00000606102 262 ntBASIC2.95□□□□□ -1.94
CD74P04233 AC016877.3-201ENST00000606778 504 ntBASIC2.95□□□□□ -1.94
CD74P04233 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.95□□□□□ -1.94
CD74P04233 AL356094.1-201ENST00000624663 1212 ntBASIC2.95□□□□□ -1.94
CD74P04233 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.95□□□□□ -1.94
CD74P04233 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.95□□□□□ -1.94
CD74P04233 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.95□□□□□ -1.94
CD74P04233 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD74P04233 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.94□□□□□ -1.94
CD74P04233 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD74P04233 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CD74P04233 AL079305.1-201ENST00000623159 3008 ntBASIC2.94□□□□□ -1.94
CD74P04233 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.94□□□□□ -1.94
CD74P04233 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.94□□□□□ -1.94
CD74P04233 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.94□□□□□ -1.94
CD74P04233 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.94□□□□□ -1.94
CD74P04233 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD74P04233 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms