Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL732618.1-201ENST00000623251 301 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.91□□□□□ -1.62
CNOT4O95628 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC010928.1-201ENST00000592477 1447 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 PABPC1P6-201ENST00000445594 1829 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 RNY3P3-201ENST00000363816 102 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 U3.10-201ENST00000364459 214 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 RNU6-767P-201ENST00000384132 107 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 RNU1-149P-201ENST00000390870 161 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 RNU6-332P-201ENST00000391193 108 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 RNU2-28P-201ENST00000410457 189 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC007161.1-204ENST00000423039 460 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 HMGB3P12-201ENST00000438745 556 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 CBX1P1-201ENST00000440184 427 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AL390119.1-201ENST00000440329 312 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 RN7SL51P-201ENST00000468230 285 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 RPL7P39-201ENST00000481157 744 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.91□□□□□ -1.62
CNOT4O95628 NIFKP7-201ENST00000503365 834 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.91□□□□□ -1.62
CNOT4O95628 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC010486.1-201ENST00000511793 424 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.91□□□□□ -1.62
CNOT4O95628 Y_RNA.672-201ENST00000516289 104 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC011712.1-201ENST00000588959 234 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.91□□□□□ -1.62
CNOT4O95628 YWHAQP7-201ENST00000603536 658 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC013553.2-201ENST00000604244 589 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AL136363.1-201ENST00000605349 337 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC113194.1-201ENST00000606037 500 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 OR6R2P-201ENST00000609216 300 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.91□□□□□ -1.62
CNOT4O95628 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 YWHAEP7-203ENST00000622054 312 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 AC132068.1-201ENST00000623805 459 ntBASIC4.91□□□□□ -1.62
CNOT4O95628 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.91□□□□□ -1.62
CNOT4O95628 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.91□□□□□ -1.62
CNOT4O95628 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.91□□□□□ -1.62
CNOT4O95628 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNOT4O95628 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CNOT4O95628 ZNF33CP-201ENST00000432492 2030 ntBASIC4.9□□□□□ -1.62
CNOT4O95628 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
CNOT4O95628 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNOT4O95628 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNOT4O95628 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNOT4O95628 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CNOT4O95628 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CNOT4O95628 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.9□□□□□ -1.62
CNOT4O95628 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.9□□□□□ -1.62
CNOT4O95628 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CNOT4O95628 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CNOT4O95628 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CNOT4O95628 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms