Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HMGB1P23-201ENST00000518743 568 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 CBX3P7-201ENST00000532876 502 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC074029.1-201ENST00000552531 1044 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 ZNF519P3-201ENST00000557158 1032 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC138932.5-201ENST00000617759 563 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC016717.3-201ENST00000624730 554 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC005609.4-201ENST00000625071 447 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC007529.1-201ENST00000418574 2178 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AL031119.1-201ENST00000404707 1879 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AL731566.1-201ENST00000620490 1937 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 FGF7P2-201ENST00000332473 296 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RNU6-374P-201ENST00000364146 108 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 OR6C69P-201ENST00000394268 893 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AL049693.1-201ENST00000402760 611 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 OR51A3P-201ENST00000413596 924 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RPL21P108-201ENST00000413857 481 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RGS17P1-201ENST00000423358 553 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RPEP3-201ENST00000425462 676 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RPS12P10-201ENST00000427031 377 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 DPPA2P1-201ENST00000428060 556 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC004938.1-201ENST00000438468 308 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC022795.1-201ENST00000473808 480 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC068587.1-201ENST00000483613 781 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RPS4XP15-201ENST00000489210 795 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RPL36AP41-201ENST00000493820 306 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RNA5SP360-201ENST00000516555 118 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC022790.1-201ENST00000522872 204 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC022882.1-201ENST00000532142 501 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC084783.1-201ENST00000565846 910 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC011451.2-201ENST00000604303 598 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 AL355816.1-201ENST00000607951 118 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 LINC00901.1-201ENST00000617252 152 ntBASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CTDP1Q9Y5B0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 AC126755.2-208ENST00000327792 462 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 AC138969.1-213ENST00000331436 462 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 RNU6-839P-201ENST00000363347 108 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 TMSB4XP8-201ENST00000402089 135 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 AL359643.1-201ENST00000404109 423 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 MIR548F1-201ENST00000408667 84 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 TMSB4XP6-201ENST00000415187 135 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 E2F6P2-201ENST00000420708 748 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 TMSB4XP1-201ENST00000424567 135 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 LARP1BP3-201ENST00000437229 869 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 EPS15P1-201ENST00000448836 336 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 AC021660.1-201ENST00000465006 554 ntBASIC5.37□□□□□ -1.55
CTDP1Q9Y5B0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms