Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC011611.1-201ENST00000552179 197 ntBASIC5.35□□□□□ -1.55
RFXAPO00287 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.35□□□□□ -1.55
RFXAPO00287 AC026470.2-201ENST00000561492 181 ntBASIC5.35□□□□□ -1.55
RFXAPO00287 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.35□□□□□ -1.55
RFXAPO00287 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.35□□□□□ -1.55
RFXAPO00287 PRELID3BP8-201ENST00000604148 295 ntBASIC5.35□□□□□ -1.55
RFXAPO00287 AL355802.3-201ENST00000607571 545 ntBASIC5.35□□□□□ -1.55
RFXAPO00287 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.35□□□□□ -1.55
RFXAPO00287 AL732618.1-201ENST00000623251 301 ntBASIC5.35□□□□□ -1.55
RFXAPO00287 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.35□□□□□ -1.55
RFXAPO00287 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.35□□□□□ -1.55
RFXAPO00287 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFXAPO00287 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFXAPO00287 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFXAPO00287 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.35□□□□□ -1.55
RFXAPO00287 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFXAPO00287 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFXAPO00287 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFXAPO00287 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.35□□□□□ -1.55
RFXAPO00287 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
RFXAPO00287 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 ASNSP1-204ENST00000641977 1664 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 AC104118.1-201ENST00000607625 1589 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFXAPO00287 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 OR5BR1P-201ENST00000524992 1330 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFXAPO00287 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFXAPO00287 RNU6-1339P-201ENST00000363574 91 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 Y_RNA.166-201ENST00000363730 102 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFXAPO00287 RNU6-452P-201ENST00000384406 107 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 AL603766.1-201ENST00000407763 664 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 GAPDHP49-201ENST00000421421 961 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC018630.2-202ENST00000422992 927 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 RPEP3-201ENST00000425462 676 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.34□□□□□ -1.55
RFXAPO00287 NOP56P2-201ENST00000447491 769 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 NPM1P39-201ENST00000449818 867 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.34□□□□□ -1.55
RFXAPO00287 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.34□□□□□ -1.55
RFXAPO00287 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFXAPO00287 AC135999.1-201ENST00000478962 479 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 KCTD9P5-201ENST00000504141 1170 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC021146.2-201ENST00000504736 556 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.34□□□□□ -1.55
RFXAPO00287 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.34□□□□□ -1.55
RFXAPO00287 KCTD9P2-201ENST00000512203 1013 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 RN7SKP116-201ENST00000516902 319 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 HSPA8P13-201ENST00000523715 472 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC013828.2-201ENST00000532487 235 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 ELOCP31-201ENST00000540463 467 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.34□□□□□ -1.55
RFXAPO00287 DNAJC8P1-201ENST00000554535 372 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 RPL21P5-201ENST00000554662 472 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC093249.1-201ENST00000567049 203 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.34□□□□□ -1.55
RFXAPO00287 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 AC006116.10-201ENST00000591836 581 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 AC243960.4-201ENST00000600532 288 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 AC090948.2-201ENST00000607363 564 ntBASIC5.34□□□□□ -1.55
RFXAPO00287 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RFXAPO00287 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.55
RFXAPO00287 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.34□□□□□ -1.56
RFXAPO00287 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.34□□□□□ -1.56
RFXAPO00287 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFXAPO00287 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
RFXAPO00287 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
RFXAPO00287 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RFXAPO00287 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RFXAPO00287 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.33□□□□□ -1.56
RFXAPO00287 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 ZNF652P1-201ENST00000442420 1309 ntBASIC5.33□□□□□ -1.56
RFXAPO00287 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 AC107982.1-201ENST00000507171 1300 ntBASIC5.33□□□□□ -1.56
RFXAPO00287 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFXAPO00287 RNU6-282P-201ENST00000365357 103 ntBASIC5.33□□□□□ -1.56
RFXAPO00287 SNORA70F-201ENST00000384142 135 ntBASIC5.33□□□□□ -1.56
RFXAPO00287 RNU6-474P-201ENST00000384243 107 ntBASIC5.33□□□□□ -1.56
RFXAPO00287 SNORA51.12-201ENST00000384448 134 ntBASIC5.33□□□□□ -1.56
RFXAPO00287 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms