Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.12□□□□□ -1.59
ATF4P18848 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.12□□□□□ -1.59
ATF4P18848 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.12□□□□□ -1.59
ATF4P18848 AC011921.2-201ENST00000589465 152 ntBASIC5.12□□□□□ -1.59
ATF4P18848 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 AL022099.1-201ENST00000604551 712 ntBASIC5.12□□□□□ -1.59
ATF4P18848 AC133644.2-201ENST00000608142 540 ntBASIC5.12□□□□□ -1.59
ATF4P18848 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 AC025034.2-201ENST00000623264 286 ntBASIC5.12□□□□□ -1.59
ATF4P18848 AC100810.6-201ENST00000638068 285 ntBASIC5.12□□□□□ -1.59
ATF4P18848 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 MTND4P29-201ENST00000503122 1372 ntBASIC5.12□□□□□ -1.59
ATF4P18848 Z95331.1-201ENST00000623075 23112 ntBASIC5.12□□□□□ -1.59
ATF4P18848 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATF4P18848 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 SAMMSON-226ENST00000642089 1582 ntBASIC5.12□□□□□ -1.59
ATF4P18848 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 CASC19-228ENST00000641414 1684 ntBASIC5.12□□□□□ -1.59
ATF4P18848 AC004925.1-201ENST00000624256 2706 ntBASIC5.11□□□□□ -1.59
ATF4P18848 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATF4P18848 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.11□□□□□ -1.59
ATF4P18848 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATF4P18848 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATF4P18848 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATF4P18848 RNA5SP350-201ENST00000363298 111 ntBASIC5.11□□□□□ -1.59
ATF4P18848 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.11□□□□□ -1.59
ATF4P18848 RNU6-1029P-201ENST00000384109 107 ntBASIC5.11□□□□□ -1.59
ATF4P18848 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATF4P18848 AC110754.1-201ENST00000399740 601 ntBASIC5.11□□□□□ -1.59
ATF4P18848 RN7SKP296-201ENST00000411185 341 ntBASIC5.11□□□□□ -1.59
ATF4P18848 RNU6-387P-201ENST00000411331 105 ntBASIC5.11□□□□□ -1.59
ATF4P18848 OR6C66P-201ENST00000414917 930 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AL672212.1-201ENST00000422246 400 ntBASIC5.11□□□□□ -1.59
ATF4P18848 PPP1R11P2-201ENST00000423543 382 ntBASIC5.11□□□□□ -1.59
ATF4P18848 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.11□□□□□ -1.59
ATF4P18848 CYCSP43-201ENST00000438233 310 ntBASIC5.11□□□□□ -1.59
ATF4P18848 HMGB3P9-201ENST00000441799 583 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.11□□□□□ -1.59
ATF4P18848 RPL31P11-202ENST00000454082 372 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.11□□□□□ -1.59
ATF4P18848 RN7SL643P-201ENST00000471845 291 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AP003385.3-201ENST00000472498 287 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.11□□□□□ -1.59
ATF4P18848 AC083906.1-201ENST00000509298 406 ntBASIC5.11□□□□□ -1.59
ATF4P18848 MTND6P2-201ENST00000512226 524 ntBASIC5.11□□□□□ -1.59
ATF4P18848 RN7SKP219-201ENST00000516825 296 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.11□□□□□ -1.59
ATF4P18848 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 SUB1P1-201ENST00000524415 382 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AP004371.1-201ENST00000525240 214 ntBASIC5.11□□□□□ -1.59
ATF4P18848 DEFB109D-201ENST00000529497 240 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC103843.2-201ENST00000530523 682 ntBASIC5.11□□□□□ -1.59
ATF4P18848 OR5B10P-201ENST00000532869 642 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.11□□□□□ -1.59
ATF4P18848 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 BNIP3P5-201ENST00000562290 498 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC092121.1-201ENST00000569452 202 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC012182.1-201ENST00000570133 895 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.11□□□□□ -1.59
ATF4P18848 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.11□□□□□ -1.59
ATF4P18848 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.11□□□□□ -1.59
ATF4P18848 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 AC092376.2-201ENST00000622621 4116 ntBASIC5.11□□□□□ -1.59
ATF4P18848 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATF4P18848 LINC01109-201ENST00000603837 3081 ntBASIC5.11□□□□□ -1.59
ATF4P18848 AC074029.4-201ENST00000624796 1859 ntBASIC5.11□□□□□ -1.59
ATF4P18848 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 AC139769.1-204ENST00000472297 1931 ntBASIC5.11□□□□□ -1.59
ATF4P18848 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATF4P18848 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ATF4P18848 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.11□□□□□ -1.59
ATF4P18848 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ATF4P18848 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 AC112198.2-201ENST00000426589 6996 ntBASIC5.1□□□□□ -1.59
ATF4P18848 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
ATF4P18848 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.1□□□□□ -1.59
ATF4P18848 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ATF4P18848 AC067945.1-201ENST00000342609 618 ntBASIC5.1□□□□□ -1.59
ATF4P18848 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 Y_RNA.11-201ENST00000362375 109 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms