Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC115286.1-201ENST00000604298 434 ntBASIC5.44□□□□□ -1.54
CNGA1P29973 AL109618.2-201ENST00000605527 211 ntBASIC5.44□□□□□ -1.54
CNGA1P29973 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.44□□□□□ -1.54
CNGA1P29973 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.44□□□□□ -1.54
CNGA1P29973 AL022401.1-201ENST00000619498 108 ntBASIC5.44□□□□□ -1.54
CNGA1P29973 AC000123.2-201ENST00000623124 461 ntBASIC5.44□□□□□ -1.54
CNGA1P29973 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.44□□□□□ -1.54
CNGA1P29973 AP000648.2-201ENST00000624182 404 ntBASIC5.44□□□□□ -1.54
CNGA1P29973 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.44□□□□□ -1.54
CNGA1P29973 CYP3A51P-201ENST00000633513 256 ntBASIC5.44□□□□□ -1.54
CNGA1P29973 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.44□□□□□ -1.54
CNGA1P29973 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
CNGA1P29973 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNGA1P29973 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNGA1P29973 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CNGA1P29973 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.44□□□□□ -1.54
CNGA1P29973 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNGA1P29973 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 AL442639.1-201ENST00000625030 1899 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.43□□□□□ -1.54
CNGA1P29973 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CNGA1P29973 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.43□□□□□ -1.54
CNGA1P29973 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.43□□□□□ -1.54
CNGA1P29973 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 RNU1-130P-201ENST00000363930 160 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CNGA1P29973 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.43□□□□□ -1.54
CNGA1P29973 TPMTP2-201ENST00000414372 726 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AC013429.2-201ENST00000418798 781 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.43□□□□□ -1.54
CNGA1P29973 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.43□□□□□ -1.54
CNGA1P29973 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.43□□□□□ -1.54
CNGA1P29973 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.43□□□□□ -1.54
CNGA1P29973 SNRPEP7-201ENST00000438350 220 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 MTCO2P7-201ENST00000446518 666 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AC000111.2-201ENST00000448200 210 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AL162591.2-201ENST00000449634 317 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 RPL7P31-201ENST00000450192 724 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 RPL7AP28-201ENST00000464513 571 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AC011276.1-201ENST00000469688 323 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 AC073073.1-201ENST00000493920 463 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.43□□□□□ -1.54
CNGA1P29973 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 PTP4A1P6-201ENST00000531034 478 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CNGA1P29973 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.43□□□□□ -1.54
CNGA1P29973 MIR5186-201ENST00000577504 120 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AC007566.2-201ENST00000603642 413 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AC064872.1-201ENST00000604823 1072 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AL031775.1-201ENST00000607014 887 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.43□□□□□ -1.54
CNGA1P29973 AC080013.4-201ENST00000607624 649 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 MIR6716-201ENST00000613413 80 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 AL049536.1-201ENST00000625043 744 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.43□□□□□ -1.54
CNGA1P29973 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.43□□□□□ -1.54
CNGA1P29973 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.43□□□□□ -1.54
CNGA1P29973 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CNGA1P29973 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNGA1P29973 AL031985.3-201ENST00000565390 2449 ntBASIC5.43□□□□□ -1.54
CNGA1P29973 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNGA1P29973 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 MAPK10-320ENST00000641462 6696 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 RPL23AP57-201ENST00000332361 466 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 RNA5SP397-201ENST00000391323 118 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.42□□□□□ -1.54
CNGA1P29973 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.42□□□□□ -1.54
CNGA1P29973 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CNGA1P29973 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 TMX2P1-201ENST00000436507 708 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.42□□□□□ -1.54
CNGA1P29973 TRIM60P18-201ENST00000441518 828 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.42□□□□□ -1.54
CNGA1P29973 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.42□□□□□ -1.54
CNGA1P29973 RPS4XP15-201ENST00000489210 795 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 AC093767.1-201ENST00000504523 156 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC091868.1-201ENST00000508746 304 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC093809.1-201ENST00000509155 340 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms