Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 TSPY17P-201ENST00000450329 467 ntBASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 AC011558.1-201ENST00000623459 338 ntBASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX11Q9Y5W9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SNX11Q9Y5W9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SNX11Q9Y5W9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.08■□□□□ 0.65
SNX11Q9Y5W9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.08■□□□□ 0.65
SNX11Q9Y5W9 BX119927.1-201ENST00000636596 1552 ntBASIC19.08■□□□□ 0.65
SNX11Q9Y5W9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX11Q9Y5W9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 AL353719.1-201ENST00000566847 864 ntBASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 AL160286.2-201ENST00000567150 934 ntBASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX11Q9Y5W9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 LINC01465-201ENST00000408887 1940 ntBASIC19.06■□□□□ 0.64
SNX11Q9Y5W9 AFG3L1P-217ENST00000557444 2447 ntBASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms