Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 AP003071.4-201ENST00000562276 1284 ntBASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 RN7SL850P-201ENST00000579959 291 ntBASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 PHGDH-210ENST00000641115 1638 ntBASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGA4Q9Y5G9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGA4Q9Y5G9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 KRT18P35-201ENST00000510488 1269 ntBASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 AC116351.2-201ENST00000606540 1585 ntBASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA4Q9Y5G9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 AL355355.2-201ENST00000442321 338 ntBASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms