Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 AC005332.7-201ENST00000614046 2005 ntBASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 KRT8P9-201ENST00000558927 1449 ntBASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 AL353807.1-201ENST00000427475 662 ntBASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 AL049597.2-201ENST00000565575 961 ntBASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB1Q9Y5F3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PCDHB1Q9Y5F3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB1Q9Y5F3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 RBM17P1-201ENST00000453646 1190 ntBASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AC145285.6-201ENST00000604632 637 ntBASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AC092865.7-201ENST00000641832 219 ntBASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 Z82202.1-201ENST00000623446 1880 ntBASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB1Q9Y5F3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 AC073195.1-201ENST00000607241 877 ntBASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 AP000525.1-201ENST00000608286 694 ntBASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 ZNF815P-204ENST00000434898 1737 ntBASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB1Q9Y5F3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 AC079598.2-202ENST00000546624 1451 ntBASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 AIRN-201ENST00000601203 4374 ntBASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 AC004264.1-201ENST00000608354 794 ntBASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 AC005363.2-201ENST00000618631 242 ntBASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB1Q9Y5F3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms