Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC26.37■■□□□ 1.81
NINLQ9Y2I6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 KRT126P-201ENST00000549467 1181 ntBASIC26.37■■□□□ 1.81
NINLQ9Y2I6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NINLQ9Y2I6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 AC104076.2-201ENST00000448912 469 ntBASIC26.36■■□□□ 1.81
NINLQ9Y2I6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 SDHAP1-207ENST00000440850 2000 ntBASIC26.36■■□□□ 1.81
NINLQ9Y2I6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 TREX1-205ENST00000625293 1783 ntBASIC26.36■■□□□ 1.81
NINLQ9Y2I6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC26.36■■□□□ 1.81
NINLQ9Y2I6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
NINLQ9Y2I6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
NINLQ9Y2I6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
NINLQ9Y2I6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
NINLQ9Y2I6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
NINLQ9Y2I6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
NINLQ9Y2I6 AC117947.1-201ENST00000427448 529 ntBASIC26.33■■□□□ 1.8
NINLQ9Y2I6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC26.33■■□□□ 1.8
NINLQ9Y2I6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.33■■□□□ 1.8
NINLQ9Y2I6 AC022616.7-201ENST00000525383 220 ntBASIC26.33■■□□□ 1.8
NINLQ9Y2I6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC26.33■■□□□ 1.8
NINLQ9Y2I6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 AC063952.2-201ENST00000498792 1227 ntBASIC26.32■■□□□ 1.8
NINLQ9Y2I6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 AC141257.4-201ENST00000634557 245 ntBASIC26.32■■□□□ 1.8
NINLQ9Y2I6 AC136944.6-201ENST00000634818 245 ntBASIC26.32■■□□□ 1.8
NINLQ9Y2I6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC26.32■■□□□ 1.8
NINLQ9Y2I6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms