Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.07□□□□□ -0.16
HHLA3Q9XRX5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 AC073210.2-201ENST00000430369 194 ntBASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HHLA3Q9XRX5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 HLA-L-209ENST00000420110 1011 ntBASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms