Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 PRSS44-201ENST00000515154 1146 ntBASIC20.39■□□□□ 0.85
CDH9Q9ULB4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 CKBP1-201ENST00000565489 1086 ntBASIC20.39■□□□□ 0.85
CDH9Q9ULB4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH9Q9ULB4 SLC25A24-204ENST00000569674 2357 ntBASIC20.38■□□□□ 0.85
CDH9Q9ULB4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 KRT8P11-201ENST00000409686 1436 ntBASIC20.38■□□□□ 0.85
CDH9Q9ULB4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 TSPY14P-201ENST00000303979 915 ntBASIC20.38■□□□□ 0.85
CDH9Q9ULB4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 EGLN1P1-201ENST00000531623 762 ntBASIC20.38■□□□□ 0.85
CDH9Q9ULB4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH9Q9ULB4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH9Q9ULB4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 KRT18P22-201ENST00000402024 1347 ntBASIC20.36■□□□□ 0.85
CDH9Q9ULB4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 TSPY21P-201ENST00000433481 731 ntBASIC20.36■□□□□ 0.85
CDH9Q9ULB4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH9Q9ULB4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms