Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.2■□□□□ 0.98
SPTLC3Q9NUV7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 AC008764.6-201ENST00000595909 2069 ntBASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 AL355472.2-201ENST00000422958 438 ntBASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 KRT18P11-201ENST00000435214 1283 ntBASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 DUX4L16-201ENST00000555130 1264 ntBASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SPTLC3Q9NUV7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 AC009053.2-201ENST00000563701 2365 ntBASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC3Q9NUV7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 AC012313.1-201ENST00000593393 3059 ntBASIC21.17■□□□□ 0.98
SPTLC3Q9NUV7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 PHGDH-210ENST00000641115 1638 ntBASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 CYP2T3P-201ENST00000601990 817 ntBASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC3Q9NUV7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SPTLC3Q9NUV7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.15■□□□□ 0.98
SPTLC3Q9NUV7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms