Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 LINC02228-204ENST00000642115 2962 ntBASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CDC42SE1Q9NRR8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 PCDHB19P-201ENST00000570871 2371 ntBASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 TMEM179-206ENST00000616017 1645 ntBASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CDC42SE1Q9NRR8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms