Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 AC004911.1-201ENST00000416316 871 ntBASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 AC005181.1-201ENST00000604782 1256 ntBASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 AC092437.1-201ENST00000624794 1048 ntBASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
PCDHB16Q9NRJ7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 AC133552.2-202ENST00000575694 574 ntBASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 IKBKGP1-201ENST00000612193 1073 ntBASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 AP000997.3-201ENST00000623333 2250 ntBASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB16Q9NRJ7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHB16Q9NRJ7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms