Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 AL355355.2-201ENST00000442321 338 ntBASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 AC026471.5-201ENST00000615068 467 ntBASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
PRDM9Q9NQV7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PRDM9Q9NQV7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PRDM9Q9NQV7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.21■□□□□ 0.5
PRDM9Q9NQV7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 AC026271.3-201ENST00000571884 352 ntBASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRDM9Q9NQV7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 AC004980.1-204ENST00000429707 299 ntBASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 NUDT16P1-203ENST00000513809 620 ntBASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 AL160286.2-201ENST00000567150 934 ntBASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 AL032819.2-201ENST00000624543 2162 ntBASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 AC116562.4-201ENST00000641316 2276 ntBASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
PRDM9Q9NQV7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms