Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD248Q9HCU0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
CD248Q9HCU0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CD248Q9HCU0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.21■□□□□ 0.83
CD248Q9HCU0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.21■□□□□ 0.83
CD248Q9HCU0 AC026471.5-201ENST00000615068 467 ntBASIC20.21■□□□□ 0.83
CD248Q9HCU0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD248Q9HCU0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.21■□□□□ 0.83
CD248Q9HCU0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD248Q9HCU0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD248Q9HCU0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.21■□□□□ 0.83
CD248Q9HCU0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.21■□□□□ 0.83
CD248Q9HCU0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 AC093503.3-201ENST00000624917 2352 ntBASIC20.2■□□□□ 0.82
CD248Q9HCU0 AC099778.1-201ENST00000568593 1911 ntBASIC20.2■□□□□ 0.82
CD248Q9HCU0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 AL121906.2-201ENST00000621597 723 ntBASIC20.2■□□□□ 0.82
CD248Q9HCU0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CD248Q9HCU0 AC120498.9-201ENST00000339021 3867 ntBASIC20.2■□□□□ 0.82
CD248Q9HCU0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD248Q9HCU0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 AL049812.1-201ENST00000432563 2267 ntBASIC20.19■□□□□ 0.82
CD248Q9HCU0 AL512408.1-201ENST00000569378 2000 ntBASIC20.19■□□□□ 0.82
CD248Q9HCU0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 AP003071.4-201ENST00000562276 1284 ntBASIC20.19■□□□□ 0.82
CD248Q9HCU0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
CD248Q9HCU0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD248Q9HCU0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 CD177P1-201ENST00000606252 935 ntBASIC20.18■□□□□ 0.82
CD248Q9HCU0 AC133561.5-201ENST00000635547 218 ntBASIC20.18■□□□□ 0.82
CD248Q9HCU0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 AL162377.1-201ENST00000618844 1793 ntBASIC20.18■□□□□ 0.82
CD248Q9HCU0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.18■□□□□ 0.82
CD248Q9HCU0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD248Q9HCU0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD248Q9HCU0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.17■□□□□ 0.82
CD248Q9HCU0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms