Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 TFP1-202ENST00000475455 1573 ntBASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLK4Q9HAZ1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLK4Q9HAZ1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 TMEM179-206ENST00000616017 1645 ntBASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 AC018553.1-201ENST00000616682 1458 ntBASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK4Q9HAZ1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 AC009237.14-201ENST00000609975 1594 ntBASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLK4Q9HAZ1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 AL138781.2-201ENST00000617896 1843 ntBASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 AL049812.1-201ENST00000432563 2267 ntBASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms