Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 HMGA1P5-201ENST00000412453 271 ntBASIC20.83■□□□□ 0.93
NXF3Q9H4D5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 AC104076.2-201ENST00000448912 469 ntBASIC20.83■□□□□ 0.93
NXF3Q9H4D5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 AL445228.2-201ENST00000605589 952 ntBASIC20.83■□□□□ 0.93
NXF3Q9H4D5 AC006011.2-201ENST00000621313 1158 ntBASIC20.83■□□□□ 0.93
NXF3Q9H4D5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF3Q9H4D5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 KRT18P35-201ENST00000510488 1269 ntBASIC20.82■□□□□ 0.92
NXF3Q9H4D5 PRSS44-201ENST00000515154 1146 ntBASIC20.82■□□□□ 0.92
NXF3Q9H4D5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 TREX1-205ENST00000625293 1783 ntBASIC20.82■□□□□ 0.92
NXF3Q9H4D5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NXF3Q9H4D5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
NXF3Q9H4D5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 CA15P1-201ENST00000481698 905 ntBASIC20.8■□□□□ 0.92
NXF3Q9H4D5 AL353719.1-201ENST00000566847 864 ntBASIC20.8■□□□□ 0.92
NXF3Q9H4D5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 AC010653.2-201ENST00000623505 997 ntBASIC20.8■□□□□ 0.92
NXF3Q9H4D5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
NXF3Q9H4D5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 TSPY23P-201ENST00000440136 739 ntBASIC20.79■□□□□ 0.92
NXF3Q9H4D5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 TSPY17P-201ENST00000450329 467 ntBASIC20.79■□□□□ 0.92
NXF3Q9H4D5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 DUX4L26-201ENST00000489078 1255 ntBASIC20.79■□□□□ 0.92
NXF3Q9H4D5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF3Q9H4D5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms