Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 PCDHAC2-203ENST00000615316 3011 ntBASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 AC092338.2-201ENST00000568827 1415 ntBASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRN3Q9H3W5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRN3Q9H3W5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.64■□□□□ 0.58
LRRN3Q9H3W5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LRRN3Q9H3W5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LRRN3Q9H3W5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRN3Q9H3W5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 AC063952.2-201ENST00000498792 1227 ntBASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 AL023803.3-201ENST00000615559 522 ntBASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LRRN3Q9H3W5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 AC139887.4-201ENST00000607877 719 ntBASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRN3Q9H3W5 LINC01465-201ENST00000408887 1940 ntBASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 RNF152P1-201ENST00000397754 604 ntBASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 AL353719.1-201ENST00000566847 864 ntBASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRN3Q9H3W5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
LRRN3Q9H3W5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRN3Q9H3W5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRN3Q9H3W5 GABARAPL3-202ENST00000624044 1851 ntBASIC18.61■□□□□ 0.57
LRRN3Q9H3W5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms