Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF39Q9H2S5 CLDN5-201ENST00000403084 2357 ntBASIC21.29■■□□□ 1
RNF39Q9H2S5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF39Q9H2S5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF39Q9H2S5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF39Q9H2S5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF39Q9H2S5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.28■■□□□ 1
RNF39Q9H2S5 MESTP1-201ENST00000404287 994 ntBASIC21.28■■□□□ 1
RNF39Q9H2S5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.28■■□□□ 1
RNF39Q9H2S5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.28■■□□□ 1
RNF39Q9H2S5 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC21.28■■□□□ 1
RNF39Q9H2S5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF39Q9H2S5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC21.28■■□□□ 1
RNF39Q9H2S5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF39Q9H2S5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.28■■□□□ 1
RNF39Q9H2S5 AC068408.1-201ENST00000577406 1144 ntBASIC21.28■■□□□ 1
RNF39Q9H2S5 AL445675.2-201ENST00000620291 557 ntBASIC21.28■■□□□ 1
RNF39Q9H2S5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.28■■□□□ 1
RNF39Q9H2S5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RNF39Q9H2S5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF39Q9H2S5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF39Q9H2S5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.27■■□□□ 1
RNF39Q9H2S5 TMEM179-206ENST00000616017 1645 ntBASIC21.27■■□□□ 1
RNF39Q9H2S5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.27■■□□□ 1
RNF39Q9H2S5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.27■■□□□ 1
RNF39Q9H2S5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.27■■□□□ 1
RNF39Q9H2S5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.27■■□□□ 1
RNF39Q9H2S5 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC21.27■■□□□ 1
RNF39Q9H2S5 AL390955.1-201ENST00000428694 934 ntBASIC21.27■■□□□ 1
RNF39Q9H2S5 MTND4P6-201ENST00000438297 472 ntBASIC21.27■■□□□ 1
RNF39Q9H2S5 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.27■■□□□ 1
RNF39Q9H2S5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC21.27■■□□□ 1
RNF39Q9H2S5 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC21.27■■□□□ 1
RNF39Q9H2S5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.27■■□□□ 1
RNF39Q9H2S5 AC022616.2-201ENST00000523185 300 ntBASIC21.27■■□□□ 1
RNF39Q9H2S5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 LINC01198-206ENST00000595532 1125 ntBASIC21.27■■□□□ 1
RNF39Q9H2S5 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RNF39Q9H2S5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.27■■□□□ 1
RNF39Q9H2S5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF39Q9H2S5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF39Q9H2S5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF39Q9H2S5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 MTND5P31-201ENST00000419366 1374 ntBASIC21.26■□□□□ 0.99
RNF39Q9H2S5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 AL359641.1-201ENST00000412509 1558 ntBASIC21.26■□□□□ 0.99
RNF39Q9H2S5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 GABARAPL3-202ENST00000624044 1851 ntBASIC21.26■□□□□ 0.99
RNF39Q9H2S5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 AL157384.1-201ENST00000445995 2473 ntBASIC21.26■□□□□ 0.99
RNF39Q9H2S5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF39Q9H2S5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 UNC93B2-201ENST00000285383 730 ntBASIC21.25■□□□□ 0.99
RNF39Q9H2S5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 MIR1238-201ENST00000408483 83 ntBASIC21.25■□□□□ 0.99
RNF39Q9H2S5 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 FAM210CP-201ENST00000445714 574 ntBASIC21.25■□□□□ 0.99
RNF39Q9H2S5 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 KRT18P21-201ENST00000515767 1272 ntBASIC21.25■□□□□ 0.99
RNF39Q9H2S5 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 AL133507.1-201ENST00000605269 557 ntBASIC21.25■□□□□ 0.99
RNF39Q9H2S5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RNF39Q9H2S5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms