Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS33BQ9H267 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS33BQ9H267 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.19■■□□□ 1.3
VPS33BQ9H267 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 KRT8P10-201ENST00000450021 1447 ntBASIC23.19■■□□□ 1.3
VPS33BQ9H267 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS33BQ9H267 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.19■■□□□ 1.3
VPS33BQ9H267 AC093525.10-201ENST00000625130 1569 ntBASIC23.18■■□□□ 1.3
VPS33BQ9H267 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.18■■□□□ 1.3
VPS33BQ9H267 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.18■■□□□ 1.3
VPS33BQ9H267 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.18■■□□□ 1.3
VPS33BQ9H267 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.18■■□□□ 1.3
VPS33BQ9H267 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.18■■□□□ 1.3
VPS33BQ9H267 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS33BQ9H267 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.18■■□□□ 1.3
VPS33BQ9H267 AC020907.5-201ENST00000624372 1936 ntBASIC23.18■■□□□ 1.3
VPS33BQ9H267 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 HLA-F-220ENST00000434407 884 ntBASIC23.17■■□□□ 1.3
VPS33BQ9H267 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.17■■□□□ 1.3
VPS33BQ9H267 UNC93B7-201ENST00000509439 705 ntBASIC23.17■■□□□ 1.3
VPS33BQ9H267 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.17■■□□□ 1.3
VPS33BQ9H267 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS33BQ9H267 AC104417.2-201ENST00000562989 1793 ntBASIC23.17■■□□□ 1.3
VPS33BQ9H267 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS33BQ9H267 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS33BQ9H267 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS33BQ9H267 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS33BQ9H267 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS33BQ9H267 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
VPS33BQ9H267 AL162741.1-201ENST00000565563 1558 ntBASIC23.16■■□□□ 1.3
VPS33BQ9H267 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS33BQ9H267 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.16■■□□□ 1.3
VPS33BQ9H267 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS33BQ9H267 CHCHD2P8-201ENST00000429873 447 ntBASIC23.16■■□□□ 1.3
VPS33BQ9H267 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS33BQ9H267 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS33BQ9H267 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms