Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 AL512353.2-201ENST00000448759 1962 ntBASIC20.07■□□□□ 0.8
DDX47Q9H0S4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 LSM12P1-201ENST00000411836 588 ntBASIC20.07■□□□□ 0.8
DDX47Q9H0S4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX47Q9H0S4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 AL133373.2-201ENST00000623187 2828 ntBASIC20.05■□□□□ 0.8
DDX47Q9H0S4 IRX1P1-201ENST00000438849 1838 ntBASIC20.05■□□□□ 0.8
DDX47Q9H0S4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX47Q9H0S4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX47Q9H0S4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 AC124283.5-201ENST00000624661 1809 ntBASIC20.03■□□□□ 0.8
DDX47Q9H0S4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms