Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
TRIM2Q9C040 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 AC026366.1-201ENST00000488803 879 ntBASIC17.7■□□□□ 0.42
TRIM2Q9C040 PRKY-204ENST00000533551 1019 ntBASIC17.7■□□□□ 0.42
TRIM2Q9C040 AC006058.3-201ENST00000606217 1069 ntBASIC17.7■□□□□ 0.42
TRIM2Q9C040 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 TNXA-203ENST00000507684 2038 ntBASIC17.7■□□□□ 0.42
TRIM2Q9C040 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM2Q9C040 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM2Q9C040 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 AC104417.2-201ENST00000562989 1793 ntBASIC17.69■□□□□ 0.42
TRIM2Q9C040 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 AP003097.1-201ENST00000530657 1135 ntBASIC17.69■□□□□ 0.42
TRIM2Q9C040 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM2Q9C040 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM2Q9C040 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM2Q9C040 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TRIM2Q9C040 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 TEX21P-204ENST00000641479 1693 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms