Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 AL138781.2-201ENST00000617896 1843 ntBASIC14.23□□□□□ -0.13
ODF3Q96PU9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 TSPY21P-201ENST00000433481 731 ntBASIC14.23□□□□□ -0.13
ODF3Q96PU9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ODF3Q96PU9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.23□□□□□ -0.13
ODF3Q96PU9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 AC090192.1-201ENST00000517740 490 ntBASIC14.22□□□□□ -0.13
ODF3Q96PU9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 C1QL1P1-201ENST00000568105 661 ntBASIC14.22□□□□□ -0.13
ODF3Q96PU9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ODF3Q96PU9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ODF3Q96PU9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 FEM1AP3-201ENST00000403722 1741 ntBASIC14.21□□□□□ -0.13
ODF3Q96PU9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 NBPF21P-201ENST00000425093 1451 ntBASIC14.21□□□□□ -0.13
ODF3Q96PU9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 IRX1P1-201ENST00000438849 1838 ntBASIC14.21□□□□□ -0.13
ODF3Q96PU9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.21□□□□□ -0.13
ODF3Q96PU9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF3Q96PU9 AC093525.10-201ENST00000625130 1569 ntBASIC14.21□□□□□ -0.14
ODF3Q96PU9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ODF3Q96PU9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ODF3Q96PU9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms