Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 AC005332.7-201ENST00000614046 2005 ntBASIC14.54□□□□□ -0.08
AP1S3Q96PC3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 AC097381.1-201ENST00000429019 1296 ntBASIC14.53□□□□□ -0.08
AP1S3Q96PC3 AC243732.1-201ENST00000612648 864 ntBASIC14.53□□□□□ -0.08
AP1S3Q96PC3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S3Q96PC3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S3Q96PC3 IRS3P-201ENST00000223076 1006 ntBASIC14.52□□□□□ -0.09
AP1S3Q96PC3 CDV3P1-201ENST00000471403 739 ntBASIC14.52□□□□□ -0.09
AP1S3Q96PC3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 MIR6084-201ENST00000622012 110 ntBASIC14.52□□□□□ -0.09
AP1S3Q96PC3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S3Q96PC3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 KRT18P20-201ENST00000548986 1279 ntBASIC14.51□□□□□ -0.09
AP1S3Q96PC3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 AP001160.3-201ENST00000601484 763 ntBASIC14.51□□□□□ -0.09
AP1S3Q96PC3 AC104187.1-201ENST00000607510 612 ntBASIC14.51□□□□□ -0.09
AP1S3Q96PC3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
AP1S3Q96PC3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms