Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ABHD17AP1-201ENST00000358206 933 ntBASIC18.19■□□□□ 0.5
COL21A1Q96P44 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
COL21A1Q96P44 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL21A1Q96P44 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.19■□□□□ 0.5
COL21A1Q96P44 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
COL21A1Q96P44 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
COL21A1Q96P44 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL21A1Q96P44 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 TFP1-202ENST00000475455 1573 ntBASIC18.18■□□□□ 0.5
COL21A1Q96P44 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 MTDHP1-201ENST00000605323 784 ntBASIC18.18■□□□□ 0.5
COL21A1Q96P44 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL21A1Q96P44 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL21A1Q96P44 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL21A1Q96P44 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
COL21A1Q96P44 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 RN7SL471P-201ENST00000580476 299 ntBASIC18.16■□□□□ 0.5
COL21A1Q96P44 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms