Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.06■□□□□ 0.96
ALPK3Q96L96 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.06■□□□□ 0.96
ALPK3Q96L96 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ALPK3Q96L96 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALPK3Q96L96 AC091304.2-201ENST00000564639 760 ntBASIC21.06■□□□□ 0.96
ALPK3Q96L96 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.05■□□□□ 0.96
ALPK3Q96L96 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.05■□□□□ 0.96
ALPK3Q96L96 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
ALPK3Q96L96 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.05■□□□□ 0.96
ALPK3Q96L96 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.05■□□□□ 0.96
ALPK3Q96L96 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.05■□□□□ 0.96
ALPK3Q96L96 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALPK3Q96L96 AC233723.2-201ENST00000623798 2106 ntBASIC21.05■□□□□ 0.96
ALPK3Q96L96 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.05■□□□□ 0.96
ALPK3Q96L96 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALPK3Q96L96 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALPK3Q96L96 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALPK3Q96L96 FP700111.2-201ENST00000619190 1892 ntBASIC21.04■□□□□ 0.96
ALPK3Q96L96 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALPK3Q96L96 FEM1AP1-201ENST00000431297 1995 ntBASIC21.04■□□□□ 0.96
ALPK3Q96L96 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALPK3Q96L96 SAPCD2P3-201ENST00000455031 850 ntBASIC21.04■□□□□ 0.96
ALPK3Q96L96 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALPK3Q96L96 POLD2P1-201ENST00000511220 997 ntBASIC21.04■□□□□ 0.96
ALPK3Q96L96 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.04■□□□□ 0.96
ALPK3Q96L96 MIR7706-201ENST00000613747 67 ntBASIC21.04■□□□□ 0.96
ALPK3Q96L96 AL157888.1-201ENST00000631930 593 ntBASIC21.04■□□□□ 0.96
ALPK3Q96L96 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 REXO1L6P-202ENST00000619970 1078 ntBASIC21.03■□□□□ 0.96
ALPK3Q96L96 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALPK3Q96L96 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
ALPK3Q96L96 AC022898.2-201ENST00000616822 1312 ntBASIC21.03■□□□□ 0.96
ALPK3Q96L96 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 AC233702.3-201ENST00000578656 1387 ntBASIC21.02■□□□□ 0.96
ALPK3Q96L96 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALPK3Q96L96 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 AC073648.2-201ENST00000510116 352 ntBASIC21.02■□□□□ 0.96
ALPK3Q96L96 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALPK3Q96L96 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ALPK3Q96L96 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.02■□□□□ 0.96
ALPK3Q96L96 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALPK3Q96L96 AL391807.1-203ENST00000604392 2365 ntBASIC21.02■□□□□ 0.96
ALPK3Q96L96 AC243591.1-201ENST00000452967 1364 ntBASIC21.02■□□□□ 0.95
ALPK3Q96L96 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.02■□□□□ 0.95
ALPK3Q96L96 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.02■□□□□ 0.95
ALPK3Q96L96 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.02■□□□□ 0.95
ALPK3Q96L96 AC099336.1-202ENST00000602961 463 ntBASIC21.02■□□□□ 0.95
ALPK3Q96L96 AL353801.3-201ENST00000609898 542 ntBASIC21.02■□□□□ 0.95
ALPK3Q96L96 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.02■□□□□ 0.95
ALPK3Q96L96 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
ALPK3Q96L96 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ALPK3Q96L96 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ALPK3Q96L96 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALPK3Q96L96 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ALPK3Q96L96 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALPK3Q96L96 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ALPK3Q96L96 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms