Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.82■□□□□ 0.92
SNX27Q96L92 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX27Q96L92 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX27Q96L92 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX27Q96L92 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX27Q96L92 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX27Q96L92 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX27Q96L92 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.81■□□□□ 0.92
SNX27Q96L92 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.81■□□□□ 0.92
SNX27Q96L92 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX27Q96L92 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX27Q96L92 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.81■□□□□ 0.92
SNX27Q96L92 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX27Q96L92 SDHAP1-207ENST00000440850 2000 ntBASIC20.81■□□□□ 0.92
SNX27Q96L92 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX27Q96L92 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX27Q96L92 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX27Q96L92 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.8■□□□□ 0.92
SNX27Q96L92 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SNX27Q96L92 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX27Q96L92 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.8■□□□□ 0.92
SNX27Q96L92 EGLN1P1-201ENST00000531623 762 ntBASIC20.8■□□□□ 0.92
SNX27Q96L92 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX27Q96L92 CKBP1-201ENST00000565489 1086 ntBASIC20.8■□□□□ 0.92
SNX27Q96L92 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX27Q96L92 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.8■□□□□ 0.92
SNX27Q96L92 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX27Q96L92 KRT18P22-201ENST00000402024 1347 ntBASIC20.79■□□□□ 0.92
SNX27Q96L92 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 KRT8P11-201ENST00000409686 1436 ntBASIC20.79■□□□□ 0.92
SNX27Q96L92 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
SNX27Q96L92 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNX27Q96L92 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SNX27Q96L92 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.79■□□□□ 0.92
SNX27Q96L92 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX27Q96L92 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SNX27Q96L92 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.78■□□□□ 0.92
SNX27Q96L92 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SNX27Q96L92 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
SNX27Q96L92 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.78■□□□□ 0.92
SNX27Q96L92 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX27Q96L92 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX27Q96L92 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SNX27Q96L92 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX27Q96L92 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX27Q96L92 INGX-201ENST00000359239 846 ntBASIC20.77■□□□□ 0.92
SNX27Q96L92 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SNX27Q96L92 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX27Q96L92 PRSS44-201ENST00000515154 1146 ntBASIC20.77■□□□□ 0.92
SNX27Q96L92 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms