Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHDQ96IW2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
SHDQ96IW2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHDQ96IW2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 AC016734.2-201ENST00000624325 1377 ntBASIC19.46■□□□□ 0.71
SHDQ96IW2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.46■□□□□ 0.71
SHDQ96IW2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.46■□□□□ 0.71
SHDQ96IW2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.46■□□□□ 0.71
SHDQ96IW2 AC092597.1-201ENST00000487352 616 ntBASIC19.46■□□□□ 0.71
SHDQ96IW2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.46■□□□□ 0.71
SHDQ96IW2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SHDQ96IW2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.46■□□□□ 0.71
SHDQ96IW2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHDQ96IW2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.46■□□□□ 0.71
SHDQ96IW2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.45■□□□□ 0.7
SHDQ96IW2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 FEM1AP1-201ENST00000431297 1995 ntBASIC19.45■□□□□ 0.7
SHDQ96IW2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SHDQ96IW2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.45■□□□□ 0.7
SHDQ96IW2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SHDQ96IW2 LINC01711-201ENST00000598340 967 ntBASIC19.45■□□□□ 0.7
SHDQ96IW2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SHDQ96IW2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.45■□□□□ 0.7
SHDQ96IW2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SHDQ96IW2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.45■□□□□ 0.7
SHDQ96IW2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SHDQ96IW2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHDQ96IW2 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.44■□□□□ 0.7
SHDQ96IW2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SHDQ96IW2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.44■□□□□ 0.7
SHDQ96IW2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SHDQ96IW2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SHDQ96IW2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SHDQ96IW2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SHDQ96IW2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.44■□□□□ 0.7
SHDQ96IW2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.44■□□□□ 0.7
SHDQ96IW2 MIR3180-1-201ENST00000580374 94 ntBASIC19.44■□□□□ 0.7
SHDQ96IW2 MIR3180-3-201ENST00000584616 94 ntBASIC19.44■□□□□ 0.7
SHDQ96IW2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SHDQ96IW2 GPALPP1-207ENST00000611650 899 ntBASIC19.44■□□□□ 0.7
SHDQ96IW2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.44■□□□□ 0.7
SHDQ96IW2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
SHDQ96IW2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHDQ96IW2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SHDQ96IW2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.43■□□□□ 0.7
SHDQ96IW2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SHDQ96IW2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 KRT8P26-201ENST00000534154 1276 ntBASIC19.43■□□□□ 0.7
SHDQ96IW2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.43■□□□□ 0.7
SHDQ96IW2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.43■□□□□ 0.7
SHDQ96IW2 MIR4674-201ENST00000582457 87 ntBASIC19.43■□□□□ 0.7
SHDQ96IW2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.43■□□□□ 0.7
SHDQ96IW2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.43■□□□□ 0.7
SHDQ96IW2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SHDQ96IW2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.43■□□□□ 0.7
SHDQ96IW2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHDQ96IW2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.43■□□□□ 0.7
SHDQ96IW2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SHDQ96IW2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SHDQ96IW2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.42■□□□□ 0.7
SHDQ96IW2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SHDQ96IW2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SHDQ96IW2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.42■□□□□ 0.7
SHDQ96IW2 PVRIG2P-201ENST00000435460 978 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms