Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 NEFHP1-201ENST00000412845 2629 ntBASIC15.2■□□□□ 0.02
NPIPB3Q92617 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 AC026185.1-201ENST00000445748 174 ntBASIC15.19■□□□□ 0.02
NPIPB3Q92617 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 AC092437.1-201ENST00000624794 1048 ntBASIC15.19■□□□□ 0.02
NPIPB3Q92617 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NPIPB3Q92617 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB3Q92617 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 AC006333.2-201ENST00000607957 2099 ntBASIC15.18■□□□□ 0.02
NPIPB3Q92617 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 AC124283.5-201ENST00000624661 1809 ntBASIC15.18■□□□□ 0.02
NPIPB3Q92617 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 MIR663A-201ENST00000385250 93 ntBASIC15.18■□□□□ 0.02
NPIPB3Q92617 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 RPS2P52-201ENST00000469610 820 ntBASIC15.18■□□□□ 0.02
NPIPB3Q92617 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 IKBKGP1-201ENST00000612193 1073 ntBASIC15.18■□□□□ 0.02
NPIPB3Q92617 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB3Q92617 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB3Q92617 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 MIPEPP3-201ENST00000412105 444 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms