Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 AC233702.5-201ENST00000584107 538 ntBASIC19.5■□□□□ 0.71
PTCD2Q8WV60 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 AC141586.3-201ENST00000562166 1838 ntBASIC19.5■□□□□ 0.71
PTCD2Q8WV60 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCD2Q8WV60 AC104417.2-201ENST00000562989 1793 ntBASIC19.49■□□□□ 0.71
PTCD2Q8WV60 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 TSPY7P-201ENST00000431358 1114 ntBASIC19.49■□□□□ 0.71
PTCD2Q8WV60 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 AP000974.1-201ENST00000623909 2387 ntBASIC19.49■□□□□ 0.71
PTCD2Q8WV60 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCD2Q8WV60 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 MIR718-201ENST00000390190 70 ntBASIC19.48■□□□□ 0.71
PTCD2Q8WV60 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCD2Q8WV60 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 AC098818.2-201ENST00000564925 2320 ntBASIC19.47■□□□□ 0.71
PTCD2Q8WV60 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 AC012618.2-201ENST00000428058 849 ntBASIC19.47■□□□□ 0.71
PTCD2Q8WV60 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 MIR4497-201ENST00000583208 89 ntBASIC19.47■□□□□ 0.71
PTCD2Q8WV60 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 AC113410.3-201ENST00000623366 203 ntBASIC19.47■□□□□ 0.71
PTCD2Q8WV60 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms