Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.83■■□□□ 1.41
SSH3Q8TE77 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SSH3Q8TE77 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.83■■□□□ 1.41
SSH3Q8TE77 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SSH3Q8TE77 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SSH3Q8TE77 TSPY21P-201ENST00000433481 731 ntBASIC23.83■■□□□ 1.41
SSH3Q8TE77 RBM17P1-201ENST00000453646 1190 ntBASIC23.83■■□□□ 1.41
SSH3Q8TE77 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
SSH3Q8TE77 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.83■■□□□ 1.41
SSH3Q8TE77 DGCR10-201ENST00000609839 495 ntBASIC23.83■■□□□ 1.41
SSH3Q8TE77 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SSH3Q8TE77 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SSH3Q8TE77 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SSH3Q8TE77 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
SSH3Q8TE77 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.83■■□□□ 1.4
SSH3Q8TE77 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.82■■□□□ 1.4
SSH3Q8TE77 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSH3Q8TE77 AC079598.2-202ENST00000546624 1451 ntBASIC23.81■■□□□ 1.4
SSH3Q8TE77 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 FAM207BP-201ENST00000447172 505 ntBASIC23.81■■□□□ 1.4
SSH3Q8TE77 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.81■■□□□ 1.4
SSH3Q8TE77 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SSH3Q8TE77 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SSH3Q8TE77 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.81■■□□□ 1.4
SSH3Q8TE77 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 AC096733.2-201ENST00000609937 1394 ntBASIC23.8■■□□□ 1.4
SSH3Q8TE77 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSH3Q8TE77 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.8■■□□□ 1.4
SSH3Q8TE77 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SSH3Q8TE77 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.79■■□□□ 1.4
SSH3Q8TE77 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.79■■□□□ 1.4
SSH3Q8TE77 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.79■■□□□ 1.4
SSH3Q8TE77 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.79■■□□□ 1.4
SSH3Q8TE77 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.79■■□□□ 1.4
SSH3Q8TE77 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSH3Q8TE77 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.78■■□□□ 1.4
SSH3Q8TE77 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms